BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C06LP1|AL425663
(777 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1530 0.0
3x_Contig38 212 7e-55
>3x_Contig1517
Length = 8289
Score = 1530 bits (771), Expect = 0.0
Identities = 775/777 (99%)
Strand = Plus / Minus
Query: 1 ccataatctggtccgttttgatattattagyttcttgcagcttaatttgatgggatattt 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6001 ccataatctggtccgttttgatattattagcctcttgcagcttaatttgatgggatattt 5942
Query: 61 cttctggagtcaacaattgctgataattctgttcagaattagttctagttcttgttctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 cttctggagtcaacaattgctgataattctgttcagaattagttctagttcttgttctta 5882
Query: 121 tgctgctatttcgaaaactactacttctggatctgttgaagatactactcaatccactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 tgctgctatttcgaaaactactacttctggatctgttgaagatactactcaatccactat 5822
Query: 181 ttctcgtttctctcgcgttgagcataacattcacacttccaggcgaggctaatgcattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 ttctcgtttctctcgcgttgagcataacattcacacttccaggcgaggctaatgcattaa 5762
Query: 241 aatgttgttggcaagatctatcaaatctctcataaaacctttggaatatctgagataatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5761 aatgttgttggcaagatctatcaaatctctcataaaacctttggaatatctgagataatt 5702
Query: 301 gtgtaatcattaaaggcctggaatatttaggctgtttcaaatcatcaatgaacaaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5701 gtgtaatcattaaaggcctggaatatttaggctgtttcaaatcatcaatgaacaaatcaa 5642
Query: 361 tcaatttcatcaattcatcaggtatactagcaatgggaatcaaatcatcattggattctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5641 tcaatttcatcaattcatcaggtatactagcaatgggaatcaaatcatcattggattctg 5582
Query: 421 aagattctattggtagttctggtgatggaggtgccgatgtgctggcagtttgaagcatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5581 aagattctattggtagttctggtgatggaggtgccgatgtgctggcagtttgaagcatga 5522
Query: 481 cattcggtttctttgcatcgctattattggaaatcgtcgaattcaaactatcgcgataag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 cattcggtttctttgcatcgctattattggaaatcgtcgaattcaaactatcgcgataag 5462
Query: 541 attcagtgatggattgtttagtatcgaaagaagcattagaaaatgggggagtatggaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5461 attcagtgatggattgtttagtatcgaaagaagcattagaaaatgggggagtatggaaca 5402
Query: 601 tagctcaattgccatacatgagcaggtccaaagatgattcacaagcttgcagtgatagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 tagctcaattgccatacatgagcaggtccaaagatgattcacaagcttgcagtgatagaa 5342
Query: 661 atcataaactttttcttataacgttgttgaagtaaaccaagttgctgtgaactaaatgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 atcataaactttttcttataacgttgttgaagtaaaccaagttgctgtgaactaaatgtt 5282
Query: 721 tcagtatgaaaaagacattcgaaacccttaattatgaagaagatcaaatacatatct 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 tcagtatgaaaaagacattcgaaacccttaattatgaagaagatcaaatacatatct 5225
>3x_Contig38
Length = 925
Score = 212 bits (107), Expect = 7e-55
Identities = 125/131 (95%)
Strand = Plus / Minus
Query: 647 ttgcagtgatagaaatcataaactttttcttataacgttgttgaagtaaaccaagttgct 706
||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 818 ttgcagtgatagaaaaaataaaattagacttataacgttgttgaagtaaaccaagttgct 759
Query: 707 gtgaactaaatgtttcagtatgaaaaagacattcgaaacccttaattatgaagaagatca 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gtgaactaaatgtttcagtatgaaaaagacattcgaaacccttaattatgaagaagatca 699
Query: 767 aatacatatct 777
|||||||||||
Sbjct: 698 aatacatatct 688
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7408
Number of Sequences: 1807
Number of extensions: 7408
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 777
length of database: 10,358,551
effective HSP length: 16
effective length of query: 761
effective length of database: 10,329,639
effective search space: 7860855279
effective search space used: 7860855279
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)